TSS: Hg 102085.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=1884 |entrez_id=1318 |gc_percent=0.432836 |gene_alias=COPT2|CTR2|hCTR2 |gene_description=solute carrier family 31 member 2 |gene_na...") |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|CTR2= | |||
|all_trans=DQ582274:-91 | |||
|chr=chr9 | |||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance_to_tss= | |distance=-91 | ||
|distance_to_tss=1835 | |||
|end=113152843 | |||
|end_of_center_position=113152842 | |||
|entrez_id=1318 | |entrez_id=1318 | ||
|gc_percent=0.432836 | |gc_percent=0.432836 | ||
|gene_alias=COPT2 | |gene_alias=COPT2{{!}}CTR2{{!}}hCTR2 | ||
|gene_description=solute carrier family 31 member 2 | |gene_description=solute carrier family 31 member 2 | ||
|gene_name=SLC31A2 | |gene_name=SLC31A2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hCTR2= | |||
|nearest_ensembl=ENSG00000136867 | |nearest_ensembl=ENSG00000136867 | ||
|nearest_promoter_id=NM_001860 | |nearest_promoter_id=NM_001860 | ||
|nearest_refseq=NM_001860 | |nearest_refseq=NM_001860 | ||
|nearest_unigene=Hs.24030 | |nearest_unigene=Hs.24030 | ||
|num_trans=1 | |||
|species=human | |||
|start=113152840 | |||
|start_of_center_position=113152841 | |||
|strand=- | |||
|transcript_name=DQ582274 | |||
|tss_classification=no | |||
|tss_id=hg_102085.1 | |tss_id=hg_102085.1 | ||
|tss_score=1 | |||
}} | }} |
Latest revision as of 16:55, 15 June 2021
Basic information about the TSS
|
| |||||||||||||
TSS cluster detected* |
---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
Distance to TSS: | 1835 |
---|---|
Nearest PromoterID: | NM_001860 |
Entrez ID: | 1318 |
Nearest Unigene: | Hs.24030 |
Nearest Refseq: | NM_001860 |
Nearest Ensembl: | ENSG00000136867 |
Gene Name: | SLC31A2 |
Gene Alias: | COPT2|CTR2|hCTR2 |
Gene Description: | solute carrier family 31 member 2 |
Gene Type: | protein-coding |
CpG%: | 0 |
GC%: | 0.432836 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |