TSS: Hg 100796.1: Difference between revisions
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{{TSSDetail | {{TSSDetail | ||
|all_trans= | |all_trans=HGNC:28537 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance= | |distance=0 | ||
|distance_to_tss=-15 | |distance_to_tss=-15 | ||
|end=68540884 | |end=68540884 | ||
|end_of_center_position=68540882 | |||
|entrez_id=169693 | |entrez_id=169693 | ||
|gc_percent=0.497512 | |gc_percent=0.497512 | ||
Line 21: | Line 22: | ||
|nearest_refseq=NM_153237 | |nearest_refseq=NM_153237 | ||
|nearest_unigene=Hs.663056 | |nearest_unigene=Hs.663056 | ||
|num_trans= | |num_trans=169693 | ||
|species=human | |species=human | ||
|start=68540879 | |start=68540879 | ||
|start_of_center_position=68540881 | |||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=-35(GAGCATATAAAG,-,0.00),-33(GCATATAAAGCT,+,0.00) | ||
|transcript_name=ENST00000377311 | |transcript_name=ENST00000377311.4 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_100796.1 | |tss_id=hg_100796.1 |
Latest revision as of 17:51, 19 July 2021
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | -15 |
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Nearest PromoterID: | NM_153237 |
Entrez ID: | 169693 |
Nearest Unigene: | Hs.663056 |
Nearest Refseq: | NM_153237 |
Nearest Ensembl: | ENSG00000181778 |
Gene Name: | transmembrane protein 252 |
Gene Alias: | C9orf71 |
Gene Description: | transmembrane protein 252 |
Gene Type: | protein-coding |
CpG%: | 0 |
GC%: | 0.497512 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -35(GAGCATATAAAG,-,0.00),-33(GCATATAAAGCT,+,0.00) |
TSS expression
Expression data not found.