TSS: Rfmm 117630.1: Difference between revisions
From referenceTSS
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|gene_type= | |gene_type= | ||
|hgnc_mgi_id=MGI:3641898 | |hgnc_mgi_id=MGI:3641898 | ||
|methods=C1CAGE | |||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_028520.1 | |nearest_promoter_id=NR_028520.1 | ||
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|peak_score=1 | |peak_score=1 | ||
|reftss_version=4 | |reftss_version=4 | ||
|source_datasets=PRJDB10397 | |||
|species=mouse | |species=mouse | ||
|start=76491291 | |start=76491291 |
Latest revision as of 01:07, 22 December 2023
Basic information about the TSS
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Source datasets | PRJDB10397 | |||||||||||||
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Protocol | C1CAGE | |||||||||||||
TSS cluster detected* | 1 |
* The number of TSS cluster called data-sets (maximum 5)
cCREs annotation
Description: | PLS (EM10D1307566,EM10E0540176) |
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Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 47 |
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Nearest PromoterID: | NR_028520.1 |
Entrez ID: | Gm10451 |
Nearest Unigene: | NR_028520 |
Nearest Refseq: | |
Nearest Ensembl: | |
Gene Name: | Gm10451 |
Gene Alias: | |
Gene Description: | |
Gene Type: | |
CpG%: | 0.036364 |
GC%: | 0.482143 |
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.