TSS: Mm 109016.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans= | |2900026P10Rik= | ||
|D12Ertd647e= | |||
|ISG12a= | |||
|Ifi27l1= | |||
|all_trans=MGI:1277180 | |||
|chr=chr12 | |chr=chr12 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=59 | |distance_to_tss=59 | ||
|end=103434281 | |end=103434281 | ||
|end_of_center_position=103434248 | |||
|entrez_id=52668 | |entrez_id=52668 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
|gene_alias=1110013J02Rik | |gene_alias=1110013J02Rik{{!}}2900026P10Rik{{!}}D12Ertd647e{{!}}ISG12a{{!}}Ifi27l1 | ||
|gene_description= | |gene_description=interferon, alpha-inducible protein 27 | ||
|gene_id=52668 | |gene_id=52668 | ||
|gene_name= | |gene_name=interferon, alpha-inducible protein 27 | ||
|gene_source=MGI:1277180 | |gene_source=MGI:1277180 | ||
|gene_symbol=Ifi27 | |gene_symbol=Ifi27 | ||
| Line 18: | Line 23: | ||
|hgnc_mgi_id=MGI:1277180 | |hgnc_mgi_id=MGI:1277180 | ||
|nearest_ensembl=ENSMUSG00000064215 | |nearest_ensembl=ENSMUSG00000064215 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_194066 | ||
|nearest_refseq=NM_026790 | |nearest_refseq=NM_026790 | ||
|nearest_unigene=Mm.2121 | |nearest_unigene=Mm.2121 | ||
|num_trans= | |num_trans=52668 | ||
|species=mouse | |species=mouse | ||
|start=103434214 | |start=103434214 | ||
|start_of_center_position=103434247 | |||
|strand=+ | |strand=+ | ||
|transcript_name= | |transcript_name=AK003665 AK075797 BC125301 BC125636 AK169926 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_109016.1 | |tss_id=mm_109016.1 | ||
Latest revision as of 13:47, 26 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 59 |
|---|---|
| Nearest PromoterID: | NM_194066 |
| Entrez ID: | 52668 |
| Nearest Unigene: | Mm.2121 |
| Nearest Refseq: | NM_026790 |
| Nearest Ensembl: | ENSMUSG00000064215 |
| Gene Name: | interferon, alpha-inducible protein 27 |
| Gene Alias: | 1110013J02Rik|2900026P10Rik|D12Ertd647e|ISG12a|Ifi27l1 |
| Gene Description: | interferon, alpha-inducible protein 27 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.