TSS: Hg 101186.1: Difference between revisions
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{{TSSDetail | {{TSSDetail | ||
|NNA1= | |NNA1= | ||
|all_trans=ENST00000662737.1:147 ENST00000661197.1:398 ENST00000648131.1:414 ENST00000669133.1:453 | |||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance= | |distance=147 | ||
|distance_to_tss=297646 | |distance_to_tss=297646 | ||
|end=85444390 | |end=85444390 | ||
|end_of_center_position=85444384 | |||
|entrez_id=23287 | |entrez_id=23287 | ||
|gc_percent=0.452736 | |gc_percent=0.452736 | ||
|gene_alias=CCP1 | |gene_alias=CCP1{{!}}CONDCA{{!}}NNA1 | ||
|gene_description=ATP/GTP binding protein 1 | |gene_description=ATP/GTP binding protein 1 | ||
|gene_name=AGTPBP1 | |gene_name=AGTPBP1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000135049 | |nearest_ensembl=ENSG00000135049 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001286717 | ||
|nearest_refseq=NM_015239 | |nearest_refseq=NM_015239 | ||
|nearest_unigene=Hs.719980 | |nearest_unigene=Hs.719980 | ||
|num_trans= | |num_trans=4 | ||
|species=human | |species=human | ||
|start=85444376 | |start=85444376 | ||
|start_of_center_position=85444383 | |||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name=ENST00000662737.1 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_101186.1 | |tss_id=hg_101186.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:34, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 297646 |
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| Nearest PromoterID: | NM_001286717 |
| Entrez ID: | 23287 |
| Nearest Unigene: | Hs.719980 |
| Nearest Refseq: | NM_015239 |
| Nearest Ensembl: | ENSG00000135049 |
| Gene Name: | AGTPBP1 |
| Gene Alias: | CCP1|CONDCA|NNA1 |
| Gene Description: | ATP/GTP binding protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.452736 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |