TSS: Hg 1012.1: Difference between revisions
From referenceTSS
No edit summary |
No edit summary |
||
| (One intermediate revision by the same user not shown) | |||
| Line 2: | Line 2: | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
|distance= | |distance=NA | ||
|distance_to_tss=17822 | |distance_to_tss=17822 | ||
|end=17636143 | |end=17636143 | ||
|end_of_center_position=17636136 | |||
|entrez_id=55160 | |entrez_id=55160 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
| Line 18: | Line 19: | ||
|species=human | |species=human | ||
|start=17636127 | |start=17636127 | ||
|start_of_center_position=17636135 | |||
|strand=+ | |strand=+ | ||
|transcript_name= | |transcript_name= | ||
Latest revision as of 16:34, 15 June 2021
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 17822 |
|---|---|
| Nearest PromoterID: | NM_001319838 |
| Entrez ID: | 55160 |
| Nearest Unigene: | Hs.443460 |
| Nearest Refseq: | NM_018125 |
| Nearest Ensembl: | ENSG00000074964 |
| Gene Name: | ARHGEF10L |
| Gene Alias: | GrinchGEF |
| Gene Description: | Rho guanine nucleotide exchange factor 10 like |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |