TSS: Hg 101222.1: Difference between revisions
From referenceTSS
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|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance= | |distance=NA | ||
|distance_to_tss=- | |distance_to_tss=-14707 | ||
|end=86369122 | |end=86369122 | ||
|end_of_center_position=86369117 | |||
|entrez_id=79670 | |entrez_id=79670 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
|gene_alias=PAPD6 | |gene_alias=PAPD6{{!}}TENT3B{{!}}ZCCHC6 | ||
|gene_description= | |gene_description=terminal uridylyl transferase 7 | ||
|gene_name= | |gene_name=TUT7 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000083223 | |nearest_ensembl=ENSG00000083223 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_024617 | ||
|nearest_refseq=NM_024617 | |nearest_refseq=NM_024617 | ||
|nearest_unigene=Hs.597057 | |nearest_unigene=Hs.597057 | ||
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|species=human | |species=human | ||
|start=86369111 | |start=86369111 | ||
|start_of_center_position=86369116 | |||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=-35(CTCCTTAAAAAC,-,0.00),-33(CCTTAAAAACCC,+,0.00) | ||
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:35, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -14707 |
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| Nearest PromoterID: | NM_024617 |
| Entrez ID: | 79670 |
| Nearest Unigene: | Hs.597057 |
| Nearest Refseq: | NM_024617 |
| Nearest Ensembl: | ENSG00000083223 |
| Gene Name: | TUT7 |
| Gene Alias: | PAPD6|TENT3B|ZCCHC6 |
| Gene Description: | terminal uridylyl transferase 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -35(CTCCTTAAAAAC,-,0.00),-33(CCTTAAAAACCC,+,0.00) |