TSS: Hg 101340.1: Difference between revisions
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{{TSSDetail | {{TSSDetail | ||
|all_trans=HGNC:27988 | |||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance= | |distance=-305 | ||
|distance_to_tss=73803 | |distance_to_tss=73803 | ||
|end=90508955 | |end=90508955 | ||
|end_of_center_position=90508943 | |||
|entrez_id=340515 | |entrez_id=340515 | ||
|gc_percent=0.482587 | |gc_percent=0.482587 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=long intergenic non-protein coding RNA 1501 | |gene_description=long intergenic non-protein coding RNA 1501 | ||
|gene_name=LINC01501 | |gene_id= | ||
|gene_name=long intergenic non-protein coding RNA 1501 | |||
|gene_source=HGNC:27988 | |||
|gene_symbol=LINC01501 | |||
|gene_synonyms= | |||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=HGNC:27988 | |||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_034157 | |nearest_promoter_id=NR_034157 | ||
|nearest_refseq=NM_001105317 | |nearest_refseq=NM_001105317 | ||
|nearest_unigene=Hs.522284 | |nearest_unigene=Hs.522284 | ||
|num_trans= | |num_trans= | ||
|species=human | |species=human | ||
|start=90508930 | |start=90508930 | ||
|start_of_center_position=90508942 | |||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name=ENST00000667748.1 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_101340.1 | |tss_id=hg_101340.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |||
}} | }} | ||
Latest revision as of 18:02, 19 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 73803 |
|---|---|
| Nearest PromoterID: | NR_034157 |
| Entrez ID: | 340515 |
| Nearest Unigene: | Hs.522284 |
| Nearest Refseq: | NM_001105317 |
| Nearest Ensembl: | |
| Gene Name: | long intergenic non-protein coding RNA 1501 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 1501 |
| Gene Type: | ncRNA |
| CpG%: | 0 |
| GC%: | 0.482587 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.