TSS: Hg 101361.1: Difference between revisions
From referenceTSS
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|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance= | |distance=NA | ||
|distance_to_tss=-10331 | |distance_to_tss=-10331 | ||
|end=91085466 | |end=91085466 | ||
|end_of_center_position=91085464 | |||
|entrez_id=100129316 | |entrez_id=100129316 | ||
|gc_percent=0.437811 | |gc_percent=0.437811 | ||
| Line 18: | Line 19: | ||
|species=human | |species=human | ||
|start=91085460 | |start=91085460 | ||
|start_of_center_position=91085463 | |||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=-33(GCCCTTAAAAAC,-,0.00),-32(CCCTTAAAAACC,+,0.00),-31(CCTTAAAAACCG,+,0.00) | ||
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:38, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -10331 |
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| Nearest PromoterID: | NR_033912 |
| Entrez ID: | 100129316 |
| Nearest Unigene: | Hs.458154 |
| Nearest Refseq: | NR_033912 |
| Nearest Ensembl: | |
| Gene Name: | LOC100129316 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100129316 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.437811 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -33(GCCCTTAAAAAC,-,0.00),-32(CCCTTAAAAACC,+,0.00),-31(CCTTAAAAACCG,+,0.00) |