TSS: Hg 101403.1: Difference between revisions
From referenceTSS
No edit summary |
No edit summary |
||
| (One intermediate revision by the same user not shown) | |||
| Line 7: | Line 7: | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance= | |distance=NA | ||
|distance_to_tss= | |distance_to_tss=69889 | ||
|end=92045525 | |end=92045525 | ||
|end_of_center_position=92045524 | |||
|entrez_id=10558 | |entrez_id=10558 | ||
|gc_percent=0.238806 | |gc_percent=0.238806 | ||
|gene_alias=HSAN1 | |gene_alias=HSAN1{{!}}HSN1{{!}}LBC1{{!}}LCB1{{!}}SPT1{{!}}SPTI | ||
|gene_description=serine palmitoyltransferase long chain base subunit 1 | |gene_description=serine palmitoyltransferase long chain base subunit 1 | ||
|gene_name=SPTLC1 | |gene_name=SPTLC1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000090054 | |nearest_ensembl=ENSG00000090054 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001368273 | ||
|nearest_refseq=NM_006415 | |nearest_refseq=NM_006415 | ||
|nearest_unigene=Hs.90458 | |nearest_unigene=Hs.90458 | ||
| Line 23: | Line 24: | ||
|species=human | |species=human | ||
|start=92045522 | |start=92045522 | ||
|start_of_center_position=92045523 | |||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name= | ||
Latest revision as of 16:39, 15 June 2021
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 69889 |
|---|---|
| Nearest PromoterID: | NM_001368273 |
| Entrez ID: | 10558 |
| Nearest Unigene: | Hs.90458 |
| Nearest Refseq: | NM_006415 |
| Nearest Ensembl: | ENSG00000090054 |
| Gene Name: | SPTLC1 |
| Gene Alias: | HSAN1|HSN1|LBC1|LCB1|SPT1|SPTI |
| Gene Description: | serine palmitoyltransferase long chain base subunit 1 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.238806 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |