TSS: Hg 101456.1: Difference between revisions
From referenceTSS
No edit summary |
No edit summary |
||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|all_trans= | |all_trans=HGNC:23385 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-3 | |distance_to_tss=-3 | ||
|end=92878063 | |end=92878063 | ||
|end_of_center_position=92878041 | |||
|entrez_id=83744 | |entrez_id=83744 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
| Line 18: | Line 19: | ||
|hgnc_mgi_id=HGNC:23385 | |hgnc_mgi_id=HGNC:23385 | ||
|nearest_ensembl=ENSG00000127081 | |nearest_ensembl=ENSG00000127081 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_031486 | ||
|nearest_refseq=NM_031486 | |nearest_refseq=NM_031486 | ||
|nearest_unigene=Hs.668378 | |nearest_unigene=Hs.668378 | ||
|num_trans= | |num_trans=83744 | ||
|species=human | |species=human | ||
|start=92878018 | |start=92878018 | ||
|start_of_center_position=92878040 | |||
|strand=- | |strand=- | ||
|transcript_name=ENST00000395505.6 ENST00000395506.7 ENST00000332591.6 | |transcript_name=ENST00000375495.8 ENST00000395505.6 ENST00000395506.7 ENST00000332591.6 AK309617 AK292997 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_101456.1 | |tss_id=hg_101456.1 | ||
Latest revision as of 18:05, 19 July 2021
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | -3 |
|---|---|
| Nearest PromoterID: | NM_031486 |
| Entrez ID: | 83744 |
| Nearest Unigene: | Hs.668378 |
| Nearest Refseq: | NM_031486 |
| Nearest Ensembl: | ENSG00000127081 |
| Gene Name: | zinc finger protein 484 |
| Gene Alias: | BA526D8.4 |
| Gene Description: | zinc finger protein 484 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.