TSS: Hg 101458.1: Difference between revisions
From referenceTSS
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|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance= | |distance=NA | ||
|distance_to_tss=- | |distance_to_tss=-476 | ||
|end=92947053 | |end=92947053 | ||
|end_of_center_position=92947048 | |||
|entrez_id=89846 | |entrez_id=89846 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
|gene_alias=ZFYVE5 | |gene_alias=ZFYVE5 | ||
|gene_description= | |gene_description=FYVE, RhoGEF and PH domain containing 3 | ||
|gene_name=FGD3 | |gene_name=FGD3 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 18: | Line 19: | ||
|species=human | |species=human | ||
|start=92947041 | |start=92947041 | ||
|start_of_center_position=92947047 | |||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=-57(GCTTAAAGAGGT,+,0.00) | ||
|transcript_name= | |transcript_name= | ||
|tss_classification=yes | |tss_classification=yes | ||
Latest revision as of 16:40, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -476 |
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| Nearest PromoterID: | NM_001083536 |
| Entrez ID: | 89846 |
| Nearest Unigene: | Hs.411081 |
| Nearest Refseq: | NM_033086 |
| Nearest Ensembl: | ENSG00000127084 |
| Gene Name: | FGD3 |
| Gene Alias: | ZFYVE5 |
| Gene Description: | FYVE, RhoGEF and PH domain containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -57(GCTTAAAGAGGT,+,0.00) |