TSS: Hg 101557.1: Difference between revisions
From referenceTSS
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|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance= | |distance=NA | ||
|distance_to_tss=-14882 | |distance_to_tss=-14882 | ||
|end=95448730 | |end=95448730 | ||
|end_of_center_position=95448727 | |||
|entrez_id=100507346 | |entrez_id=100507346 | ||
|gc_percent=0.378109 | |gc_percent=0.378109 | ||
| Line 18: | Line 19: | ||
|species=human | |species=human | ||
|start=95448723 | |start=95448723 | ||
|start_of_center_position=95448726 | |||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=-3(CCTCTTAAGGTG,+,0.00) | ||
|transcript_name= | |transcript_name= | ||
|tss_classification= | |tss_classification=yes | ||
|tss_id=hg_101557.1 | |tss_id=hg_101557.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:06, 12 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -14882 |
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| Nearest PromoterID: | NR_038982 |
| Entrez ID: | 100507346 |
| Nearest Unigene: | Hs.661847 |
| Nearest Refseq: | NR_038982 |
| Nearest Ensembl: | |
| Gene Name: | LOC100507346 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100507346 |
| Gene Type: | ncRNA |
| CpG%: | 0 |
| GC%: | 0.378109 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -3(CCTCTTAAGGTG,+,0.00) |