TSS: Hg 101616.1: Difference between revisions
From referenceTSS
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 2: | Line 2: | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance= | |distance=NA | ||
|distance_to_tss=-49722 | |distance_to_tss=-49722 | ||
|end=97188712 | |end=97188712 | ||
|end_of_center_position=97188705 | |||
|entrez_id=57653 | |entrez_id=57653 | ||
|gc_percent=0.40796 | |gc_percent=0.40796 | ||
|gene_alias=- | |gene_alias=LOC100499484-C9ORF174 | ||
|gene_description= | |gene_description=SUGT1P4-STRA6LP-CCDC180 readthrough | ||
|gene_name= | |gene_name=SUGT1P4-STRA6LP-CCDC180 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|nearest_ensembl=ENSG00000255036 | |nearest_ensembl=ENSG00000255036 | ||
Line 18: | Line 19: | ||
|species=human | |species=human | ||
|start=97188696 | |start=97188696 | ||
|start_of_center_position=97188704 | |||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name= |
Latest revision as of 16:44, 15 June 2021
Basic information about the TSS
|
| |||||||||||||
TSS cluster detected* |
---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
Distance to TSS: | -49722 |
---|---|
Nearest PromoterID: | NR_036527 |
Entrez ID: | 57653 |
Nearest Unigene: | Hs.435629 |
Nearest Refseq: | NR_036527 |
Nearest Ensembl: | ENSG00000255036 |
Gene Name: | SUGT1P4-STRA6LP-CCDC180 |
Gene Alias: | LOC100499484-C9ORF174 |
Gene Description: | SUGT1P4-STRA6LP-CCDC180 readthrough |
Gene Type: | ncRNA |
CpG%: | 0.005 |
GC%: | 0.40796 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |