TSS: Hg 101891.1: Difference between revisions
From referenceTSS
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|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance= | |distance=NA | ||
|distance_to_tss=9133 | |distance_to_tss=9133 | ||
|end=109408656 | |end=109408656 | ||
|end_of_center_position=109408650 | |||
|entrez_id=5774 | |entrez_id=5774 | ||
|gc_percent=0.522388 | |gc_percent=0.522388 | ||
|gene_alias=PTP-H1 | |gene_alias=PTP-H1{{!}}PTPH1 | ||
|gene_description= | |gene_description=protein tyrosine phosphatase non-receptor type 3 | ||
|gene_name=PTPN3 | |gene_name=PTPN3 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
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|species=human | |species=human | ||
|start=109408643 | |start=109408643 | ||
|start_of_center_position=109408649 | |||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=-36(GCGTTTTTAAGG,-,0.00),-34(GTTTTTAAGGAG,+,0.00) | ||
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:50, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 9133 |
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| Nearest PromoterID: | NR_026918 |
| Entrez ID: | 5774 |
| Nearest Unigene: | Hs.436429 |
| Nearest Refseq: | NM_002829 |
| Nearest Ensembl: | ENSG00000070159 |
| Gene Name: | PTPN3 |
| Gene Alias: | PTP-H1|PTPH1 |
| Gene Description: | protein tyrosine phosphatase non-receptor type 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -36(GCGTTTTTAAGG,-,0.00),-34(GTTTTTAAGGAG,+,0.00) |