TSS: Mm 118441.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000112689.8:0 ENSMUST00000036682.7:0 NM_178279:0 NM_145458:0 uc007ser.2:0 uc007ses.2:0 uc007set.2:0 uc011zfv.1:0 uc007seu.2:0 AK150660:0 AK1724...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans= | |D14Ertd813e= | ||
|MONaKA= | |||
|all_trans=MGI:1289230 | |||
|chr=chr14 | |chr=chr14 | ||
|cpg_percent=0.175 | |cpg_percent=0.175 | ||
|distance=0 | |distance=0 | ||
|distance_to_tss= | |distance_to_tss=35 | ||
|end=8098296 | |end=8098296 | ||
|end_of_center_position=8098247 | |||
|entrez_id=218699 | |entrez_id=218699 | ||
|gc_percent=0.800995 | |gc_percent=0.800995 | ||
|gene_alias=C230080L11Rik | |gene_alias=C230080L11Rik{{!}}D14Ertd813e{{!}}Monaka{{!}}Slob | ||
|gene_description=PX domain containing serine/threonine kinase | |gene_description=PX domain containing serine/threonine kinase | ||
|gene_id=218699 | |gene_id=218699 | ||
| Line 21: | Line 24: | ||
|nearest_refseq=NM_145458 | |nearest_refseq=NM_145458 | ||
|nearest_unigene=Mm.29515 | |nearest_unigene=Mm.29515 | ||
|num_trans= | |num_trans=218699 | ||
|species=mouse | |species=mouse | ||
|start=8098196 | |start=8098196 | ||
|start_of_center_position=8098246 | |||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000112689.8 | |transcript_name=ENSMUST00000036682.8 ENSMUST00000112689.8 ENSMUST00000225827.1 ENSMUST00000225616.1 ENSMUST00000225653.1 AK150660 AK172463 AK147037 AK170361 AK157364 AK150337 AK150413 BC016131 AK156146 AK169565 AK048910 AK169112 AK151098 AK152058 AK152789 AK153067 AK172347 AK028501 AK166036 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_118441.1 | |tss_id=mm_118441.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q3T9R1 Q8BX57 | |uniprot_id=A0A2C9F2B5 Q3T9R1 Q8BX57 | ||
}} | }} | ||
Latest revision as of 17:14, 26 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 35 |
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| Nearest PromoterID: | NM_178279 |
| Entrez ID: | 218699 |
| Nearest Unigene: | Mm.29515 |
| Nearest Refseq: | NM_145458 |
| Nearest Ensembl: | ENSMUSG00000033885 |
| Gene Name: | PX domain containing serine/threonine kinase |
| Gene Alias: | C230080L11Rik|D14Ertd813e|Monaka|Slob |
| Gene Description: | PX domain containing serine/threonine kinase |
| Gene Type: | protein-coding |
| CpG%: | 0.175 |
| GC%: | 0.800995 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.