TSS: Hg 102030.1: Difference between revisions
From referenceTSS
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|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance= | |distance=NA | ||
|distance_to_tss= | |distance_to_tss=31244 | ||
|end=111728299 | |end=111728299 | ||
|end_of_center_position=111728293 | |||
|entrez_id=158401 | |entrez_id=158401 | ||
|gc_percent=0.358209 | |gc_percent=0.358209 | ||
|gene_alias= | |gene_alias=C9orf84{{!}}ZIP2{{!}}ZIP2H | ||
|gene_description= | |gene_description=shortage in chiasmata 1 | ||
|gene_name= | |gene_name=SHOC1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000165181 | |nearest_ensembl=ENSG00000165181 | ||
| Line 18: | Line 19: | ||
|species=human | |species=human | ||
|start=111728285 | |start=111728285 | ||
|start_of_center_position=111728292 | |||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name= | ||
Latest revision as of 16:53, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 31244 |
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| Nearest PromoterID: | NM_001080551 |
| Entrez ID: | 158401 |
| Nearest Unigene: | Hs.428209 |
| Nearest Refseq: | NM_173521 |
| Nearest Ensembl: | ENSG00000165181 |
| Gene Name: | SHOC1 |
| Gene Alias: | C9orf84|ZIP2|ZIP2H |
| Gene Description: | shortage in chiasmata 1 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.358209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |