TSS: Hg 102156.1: Difference between revisions
From referenceTSS
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|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance= | |distance=NA | ||
|distance_to_tss= | |distance_to_tss=2502 | ||
|end=114385502 | |end=114385502 | ||
|end_of_center_position=114385480 | |||
|entrez_id=80709 | |entrez_id=80709 | ||
|gc_percent=0.522388 | |gc_percent=0.522388 | ||
| Line 18: | Line 19: | ||
|species=human | |species=human | ||
|start=114385457 | |start=114385457 | ||
|start_of_center_position=114385479 | |||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=-41(CCCTTTAAAAAG,+,0.00),-41(CCCTTTAAAAAG,-,0.00),-39(CTTTAAAAAGTC,+,0.00) | ||
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:56, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 2502 |
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| Nearest PromoterID: | NM_001317950 |
| Entrez ID: | 80709 |
| Nearest Unigene: | Hs.494895 |
| Nearest Refseq: | NM_030767 |
| Nearest Ensembl: | ENSG00000106948 |
| Gene Name: | AKNA |
| Gene Alias: | - |
| Gene Description: | AT-hook transcription factor |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -41(CCCTTTAAAAAG,+,0.00),-41(CCCTTTAAAAAG,-,0.00),-39(CTTTAAAAAGTC,+,0.00) |