TSS: Hg 10218.1: Difference between revisions
From referenceTSS
No edit summary |
No edit summary |
||
| (2 intermediate revisions by the same user not shown) | |||
| Line 3: | Line 3: | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
|distance= | |distance=NA | ||
|distance_to_tss=-20401 | |distance_to_tss=-20401 | ||
|end=9202741 | |end=9202741 | ||
|end_of_center_position=9202739 | |||
|entrez_id=106614088 | |entrez_id=106614088 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
| Line 16: | Line 17: | ||
|nearest_refseq=NR_132742 | |nearest_refseq=NR_132742 | ||
|nearest_unigene=Hs.551837 | |nearest_unigene=Hs.551837 | ||
|num_trans= | |num_trans=0 | ||
|species=human | |species=human | ||
|start=9202736 | |start=9202736 | ||
|start_of_center_position=9202738 | |||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name= | ||
|tss_classification= | |tss_classification=no | ||
|tss_id=hg_10218.1 | |tss_id=hg_10218.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:19, 12 July 2021
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | -20401 |
|---|---|
| Nearest PromoterID: | NR_132742 |
| Entrez ID: | 106614088 |
| Nearest Unigene: | Hs.551837 |
| Nearest Refseq: | NR_132742 |
| Nearest Ensembl: | ENSG00000228526 |
| Gene Name: | MIR34AHG |
| Gene Alias: | - |
| Gene Description: | MIR34A host gene |
| Gene Type: | ncRNA |
| CpG%: | 0.04 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |