TSS: Hg 102227.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=-554 |entrez_id=3371 |gc_percent=0.562189 |gene_alias=150-225|DFNA56|GMEM|GP|HXB|JI|TN|TN-C |gene_description=tenascin C |gene_...") |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|DFNA56= | |||
|GMEM= | |||
|GP= | |||
|HXB= | |||
|JI= | |||
|TN= | |||
|TN-C= | |||
|chr=chr9 | |||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance_to_tss=- | |distance=NA | ||
|distance_to_tss=-654 | |||
|end=115118835 | |||
|end_of_center_position=115118811 | |||
|entrez_id=3371 | |entrez_id=3371 | ||
|gc_percent=0.562189 | |gc_percent=0.562189 | ||
|gene_alias=150-225 | |gene_alias=150-225{{!}}DFNA56{{!}}GMEM{{!}}GP{{!}}HXB{{!}}JI{{!}}TN{{!}}TN-C | ||
|gene_description=tenascin C | |gene_description=tenascin C | ||
|gene_name=TNC | |gene_name=TNC | ||
Line 12: | Line 23: | ||
|nearest_refseq=NM_002160 | |nearest_refseq=NM_002160 | ||
|nearest_unigene=Hs.143250 | |nearest_unigene=Hs.143250 | ||
|num_trans=0 | |||
|species=human | |||
|start=115118786 | |||
|start_of_center_position=115118810 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_102227.1 | |tss_id=hg_102227.1 | ||
|tss_score=1 | |||
}} | }} |
Latest revision as of 16:58, 15 June 2021
Basic information about the TSS
|
| |||||||||||||
TSS cluster detected* |
---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
Distance to TSS: | -654 |
---|---|
Nearest PromoterID: | NM_002160 |
Entrez ID: | 3371 |
Nearest Unigene: | Hs.143250 |
Nearest Refseq: | NM_002160 |
Nearest Ensembl: | ENSG00000041982 |
Gene Name: | TNC |
Gene Alias: | 150-225|DFNA56|GMEM|GP|HXB|JI|TN|TN-C |
Gene Description: | tenascin C |
Gene Type: | protein-coding |
CpG%: | 0.015 |
GC%: | 0.562189 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |