TSS: Hg 102229.1: Difference between revisions
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{{TSSDetail | {{TSSDetail | ||
|all_trans=LF355125:92 MA590702:92 | |||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance= | |distance=92 | ||
|distance_to_tss=2928 | |distance_to_tss=2928 | ||
|end=115144761 | |end=115144761 | ||
|end_of_center_position=115144746 | |||
|entrez_id=50514 | |entrez_id=50514 | ||
|gc_percent=0.487562 | |gc_percent=0.487562 | ||
|gene_alias=CTS9 | |gene_alias=CTS9 | ||
|gene_description=deleted in esophageal cancer 1 | |gene_description=deleted in esophageal cancer 1 | ||
|gene_name= | |gene_name=DEC1 | ||
|gene_type= | |gene_type=ncRNA | ||
|nearest_ensembl=ENSG00000173077 | |nearest_ensembl=ENSG00000173077 | ||
|nearest_promoter_id= | |nearest_promoter_id=NR_163556 | ||
|nearest_refseq=NM_017418 | |nearest_refseq=NM_017418 | ||
|nearest_unigene=Hs.148841 | |nearest_unigene=Hs.148841 | ||
|num_trans= | |num_trans=2 | ||
|species=human | |species=human | ||
|start=115144730 | |start=115144730 | ||
|start_of_center_position=115144745 | |||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name=LF355125 MA590702 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_102229.1 | |tss_id=hg_102229.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:58, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 2928 |
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| Nearest PromoterID: | NR_163556 |
| Entrez ID: | 50514 |
| Nearest Unigene: | Hs.148841 |
| Nearest Refseq: | NM_017418 |
| Nearest Ensembl: | ENSG00000173077 |
| Gene Name: | DEC1 |
| Gene Alias: | CTS9 |
| Gene Description: | deleted in esophageal cancer 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |