TSS: Hg 102267.1: Difference between revisions
From referenceTSS
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|DBCCR1= | |DBCCR1= | ||
|FAM5A= | |FAM5A= | ||
|all_trans= | |||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance= | |distance=0 | ||
|distance_to_tss= | |distance_to_tss=53083 | ||
|end=118732772 | |end=118732772 | ||
|entrez_id= | |end_of_center_position=118732755 | ||
|entrez_id=111216287 | |||
|gc_percent=0.41791 | |gc_percent=0.41791 | ||
|gene_alias= | |gene_alias=- | ||
| | |gene_description=long intergenic non-protein coding RNA 2578 | ||
| | |gene_id=102724929 | ||
|gene_type= | |gene_name=uncharacterized LOC102724929 | ||
|nearest_ensembl= | |gene_source=EntrezGene:102724929 | ||
|nearest_promoter_id= | |gene_symbol=LOC102724929 | ||
|nearest_refseq= | |gene_synonyms= | ||
|nearest_unigene= | |gene_type=ncRNA | ||
|num_trans= | |hgnc_mgi_id= | ||
|nearest_ensembl= | |||
|nearest_promoter_id=NR_151725 | |||
|nearest_refseq=NR_151725 | |||
|nearest_unigene= | |||
|num_trans=102724929 | |||
|species=human | |species=human | ||
|start=118732736 | |start=118732736 | ||
|start_of_center_position=118732754 | |||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=-61(CACTTTATGAGG,-,0.00) | ||
|transcript_name= | |transcript_name=ENST00000670605.1 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_102267.1 | |tss_id=hg_102267.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |||
}} | }} | ||
Latest revision as of 18:23, 19 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 53083 |
|---|---|
| Nearest PromoterID: | NR_151725 |
| Entrez ID: | 111216287 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_151725 |
| Nearest Ensembl: | |
| Gene Name: | uncharacterized LOC102724929 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 2578 |
| Gene Type: | ncRNA |
| CpG%: | 0 |
| GC%: | 0.41791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -61(CACTTTATGAGG,-,0.00) |
TSS expression
Expression data not found.