TSS: Hg 102237.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000645745.1:0 ENST00000644998.1:0 ENST00000644298.1:0 ENST00000433546.3:2 NR_109805:2 ENST00000646338.1:-64 ENST00000642165.1:377 | |||
|chr=chr9 | |||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
|distance=0 | |||
|distance_to_tss=-14 | |distance_to_tss=-14 | ||
|end=115744266 | |||
|end_of_center_position=115744254 | |||
|entrez_id=101928775 | |entrez_id=101928775 | ||
|gc_percent=0.527363 | |gc_percent=0.527363 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=uncharacterized LOC101928775 | |gene_description=uncharacterized LOC101928775 | ||
|gene_id=101928775 | |||
|gene_name=LOC101928775 | |gene_name=LOC101928775 | ||
|gene_source=EntrezGene:101928775 | |||
|gene_symbol=LOC101928775 | |||
|gene_synonyms= | |||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id= | |||
|nearest_ensembl=ENSG00000228714 | |nearest_ensembl=ENSG00000228714 | ||
|nearest_promoter_id=NR_109805 | |nearest_promoter_id=NR_109805 | ||
|nearest_refseq=NR_109805 | |nearest_refseq=NR_109805 | ||
|nearest_unigene=Hs.522362 | |nearest_unigene=Hs.522362 | ||
|tata_box= | |num_trans=7 | ||
|species=human | |||
|start=115744240 | |||
|start_of_center_position=115744253 | |||
|strand=- | |||
|tata_box=-86(GCGTATTAAGAG,-,0.00) | |||
|transcript_name=ENST00000645745.1 ENST00000644998.1 ENST00000644298.1 | |||
|tss_classification=no | |||
|tss_id=hg_102237.1 | |tss_id=hg_102237.1 | ||
|tss_score=1 | |||
|uniprot_id= | |||
}} | }} | ||
Latest revision as of 16:58, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -14 |
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| Nearest PromoterID: | NR_109805 |
| Entrez ID: | 101928775 |
| Nearest Unigene: | Hs.522362 |
| Nearest Refseq: | NR_109805 |
| Nearest Ensembl: | ENSG00000228714 |
| Gene Name: | LOC101928775 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC101928775 |
| Gene Type: | ncRNA |
| CpG%: | 0.045 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -86(GCGTATTAAGAG,-,0.00) |
TSS expression
Expression data not found.