TSS: Hg 102238.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|EST-YD1= | |||
|chr=chr9 | |||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=80627 | |||
|end=115844585 | |||
|end_of_center_position=115844581 | |||
|entrez_id=58483 | |entrez_id=58483 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
|gene_alias=C9orf27 | |gene_alias=C9orf27{{!}}EST-YD1 | ||
|gene_description=long intergenic non-protein coding RNA 474 | |gene_description=long intergenic non-protein coding RNA 474 | ||
|gene_name=LINC00474 | |gene_name=LINC00474 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|nearest_ensembl= | |nearest_ensembl=ENSG00000204148 | ||
|nearest_promoter_id=NR_024032 | |nearest_promoter_id=NR_024032 | ||
|nearest_refseq= | |nearest_refseq=NR_024032 | ||
|nearest_unigene=Hs.23367 | |nearest_unigene=Hs.23367 | ||
|num_trans=0 | |||
|species=human | |||
|start=115844575 | |||
|start_of_center_position=115844580 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_102238.1 | |tss_id=hg_102238.1 | ||
|tss_score=1 | |||
}} | }} |
Latest revision as of 16:58, 15 June 2021
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 80627 |
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Nearest PromoterID: | NR_024032 |
Entrez ID: | 58483 |
Nearest Unigene: | Hs.23367 |
Nearest Refseq: | NR_024032 |
Nearest Ensembl: | ENSG00000204148 |
Gene Name: | LINC00474 |
Gene Alias: | C9orf27|EST-YD1 |
Gene Description: | long intergenic non-protein coding RNA 474 |
Gene Type: | ncRNA |
CpG%: | 0.03 |
GC%: | 0.512438 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |