TSS: Mm 121585.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans= | |all_trans=MGI:3781589 | ||
|chr=chr14 | |chr=chr14 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-85 | |distance_to_tss=-85 | ||
|end=6287344 | |end=6287344 | ||
|end_of_center_position=6287336 | |||
|entrez_id=100861615 | |entrez_id=100861615 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_001270812 | |nearest_refseq=NM_001270812 | ||
|nearest_unigene=Mm.488431 | |nearest_unigene=Mm.488431 | ||
|num_trans= | |num_trans=100861615 | ||
|species=mouse | |species=mouse | ||
|start=6287326 | |start=6287326 | ||
|start_of_center_position=6287335 | |||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000170104.2 | |transcript_name=ENSMUST00000170104.2 AK049619 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_121585.1 | |tss_id=mm_121585.1 | ||
Latest revision as of 18:22, 26 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -85 |
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| Nearest PromoterID: | NM_001270812 |
| Entrez ID: | 100861615 |
| Nearest Unigene: | Mm.488431 |
| Nearest Refseq: | NM_001270812 |
| Nearest Ensembl: | ENSMUSG00000079396 |
| Gene Name: | predicted gene 3411 |
| Gene Alias: | - |
| Gene Description: | alpha takusan-like |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.