TSS: Rfhg 102738.1: Difference between revisions

Latest revision as of 11:55, 13 March 2025

Basic information about the TSS

TSS ID:	rfhg_102738.1
TSS ID(Version3):	hg_87099.1
Species:	human
Chr:	chr7

Start:	158432016
End:	158432053
Strand:	-

Source datasets

FANTOM5|PRJNA615891|PRJNA548673|PRJDB5282

Protocol

CAGE|TIF-seq2|ReCappable-seq|C1CAGE

TSS cluster detected^*

5

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	dELS (EH38D4053098,EH38E2605094)
Category:	dELS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:

Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	100779
Nearest PromoterID:	NR_030325
Entrez ID:	693180
Nearest Unigene:
Nearest Refseq:	NR_030325
Nearest Ensembl:	ENSG00000207637
Gene Name:
Gene Alias:	MIRN595\|hsa-mir-595
Gene Type:	ncRNA
CpG%:	0.000000
GC%:	0.500000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=
 |annotation=intron (NM_130842, intron 1 of 21)
 |ccre_category=dELS
@@ Line 15: / Line 16: @@
 |gene_description=microRNA 595
 |gene_id=
-|gene_name=MIR595
+|gene_name=
 |gene_source=
 |gene_symbol=
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NR_030325
 |nearest_refseq=NR_030325
+|nearest_transcripts=
 |nearest_unigene=
 |peak_score=1