TSS: Rfhg 124788.1: Difference between revisions

Latest revision as of 18:45, 13 March 2025

Basic information about the TSS

TSS ID:	rfhg_124788.1
Species:	human
Chr:	chr10

Start:	37125594
End:	37125605
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000374660.7:0 ENST00000602533.7:0 ENST00000361713.2:0
GeneID:	91074
HGNC/MGI_ID:	HGNC:17234
UniProt_ID:	Q5W026 Q9BXX3 R4GNA2
Nearer transcript ids and distances:	AF269087:252 BC172447:351 view more...

Gene_name:	ankyrin repeat domain 30A
Gene_symbol:	ANKRD30A
Gene_synonyms:	NY-BR-1
Gene_source:	HGNC:17234

TATA-Box annotation

Distance to TSS:	-258
Nearest PromoterID:	NM_052997
Entrez ID:	91074
Nearest Unigene:	Hs.373787
Nearest Refseq:	NM_052997
Nearest Ensembl:	ENSG00000148513
Gene Name:	ankyrin repeat domain 30A
Gene Alias:	NY-BR-1
Gene Type:	protein-coding
CpG%:	0.090909
GC%:	0.583333
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=ENST00000374660.7:0 ENST00000602533.7:0 ENST00000361713.2:0 NM_052997.3:0 AF269087:252 BC172447:351
 |annotation=promoter-TSS (NM_052997)
 |ccre_category=N
@@ Line 15: / Line 16: @@
 |gene_description=ankyrin repeat domain 30A
 |gene_id=91074
-|gene_name=ANKRD30A
+|gene_name=ankyrin repeat domain 30A
 |gene_source=HGNC:17234
 |gene_symbol=ANKRD30A
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_052997
 |nearest_refseq=NM_052997
+|nearest_transcripts=AF269087:252 BC172447:351
 |nearest_unigene=Hs.373787
 |peak_score=1