TSS: Hg 102618.1: Difference between revisions
From referenceTSS
No edit summary |
No edit summary |
||
| (2 intermediate revisions by the same user not shown) | |||
| Line 4: | Line 4: | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance= | |distance=-18 | ||
|distance_to_tss=-1237 | |distance_to_tss=-1237 | ||
|end=127906598 | |end=127906598 | ||
|end_of_center_position=127906586 | |||
|entrez_id=30815 | |entrez_id=30815 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
|gene_alias=SIAT7-F | |gene_alias=SIAT7-F{{!}}SIAT7F{{!}}ST6GALNACVI | ||
|gene_description= | |gene_description=ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 | ||
|gene_name=ST6GALNAC6 | |gene_name=ST6GALNAC6 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000160408 | |nearest_ensembl=ENSG00000160408 | ||
|nearest_promoter_id= | |nearest_promoter_id=NR_104629 | ||
|nearest_refseq=NM_013443 | |nearest_refseq=NM_013443 | ||
|nearest_unigene=Hs.109672 | |nearest_unigene=Hs.109672 | ||
| Line 20: | Line 21: | ||
|species=human | |species=human | ||
|start=127906572 | |start=127906572 | ||
|start_of_center_position=127906585 | |||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name=NM_001388489.1 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_102618.1 | |tss_id=hg_102618.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:31, 19 July 2021
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | -1237 |
|---|---|
| Nearest PromoterID: | NR_104629 |
| Entrez ID: | 30815 |
| Nearest Unigene: | Hs.109672 |
| Nearest Refseq: | NM_013443 |
| Nearest Ensembl: | ENSG00000160408 |
| Gene Name: | ST6GALNAC6 |
| Gene Alias: | SIAT7-F|SIAT7F|ST6GALNACVI |
| Gene Description: | ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |