TSS: Rfhg 128878.1: Difference between revisions

Latest revision as of 19:59, 13 March 2025

Basic information about the TSS

TSS ID:	rfhg_128878.1
Species:	human
Chr:	chr10

Start:	96832306
End:	96832322
Strand:	-

Source datasets

ENCODE

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS,CTCF-bound (EH38D2379195,EH38E1491374)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	AB593180:-136
GeneID:	102723665
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:

Gene_name:	uncharacterized LOC102723665
Gene_symbol:	LOC102723665
Gene_synonyms:
Gene_source:	EntrezGene:102723665

TATA-Box annotation

Distance to TSS:	16
Nearest PromoterID:	NM_001170765
Entrez ID:	84458
Nearest Unigene:	Hs.427927
Nearest Refseq:	NM_015652
Nearest Ensembl:	ENSG00000196233
Gene Name:	uncharacterized LOC102723665
Gene Alias:	C10orf12\|MLR2
Gene Type:	protein-coding
CpG%:	0.125000
GC%:	0.705882
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=NR_135921.1:-136 AB593180:-136
 |annotation=promoter-TSS (NM_032440)
 |ccre_category=PLS
@@ Line 15: / Line 16: @@
 |gene_description=ligand dependent nuclear receptor corepressor
 |gene_id=102723665
-|gene_name=LCOR
+|gene_name=uncharacterized LOC102723665
 |gene_source=EntrezGene:102723665
 |gene_symbol=LOC102723665
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_001170765
 |nearest_refseq=NM_015652
+|nearest_transcripts=
 |nearest_unigene=Hs.427927
 |peak_score=1