TSS: Rfhg 131377.1: Difference between revisions

Latest revision as of 20:46, 13 March 2025

Basic information about the TSS

TSS ID:	rfhg_131377.1
Species:	human
Chr:	chr10

Start:	124942884
End:	124943107
Strand:	+

Source datasets

PRJDB5282

Protocol

C1CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	pELS (EH38D2403870,EH38E1508110)
Category:	pELS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	AL832925:0
GeneID:	54764
HGNC/MGI_ID:	HGNC:18224
UniProt_ID:
Nearer transcript ids and distances:	LF370167:-128 MA605744:-128 BC152728:-394 AK307386:-401 view more...

Gene_name:	zinc finger RANBP2-type containing 1
Gene_symbol:	ZRANB1
Gene_synonyms:	TRABID
Gene_source:	HGNC:18224

TATA-Box annotation

Distance to TSS:	872
Nearest PromoterID:	NM_017580
Entrez ID:	54764
Nearest Unigene:	Hs.595158
Nearest Refseq:	NM_017580
Nearest Ensembl:	ENSG00000019995
Gene Name:	zinc finger RANBP2-type containing 1
Gene Alias:	TRABID
Gene Type:	protein-coding
CpG%:	0.004484
GC%:	0.410714
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=AL832925:0 LF370168:0 MA605745:0 LF370167:-128 MA605744:-128 BC152728:-394 AK307386:-401
 |annotation=exon (NM_017580, exon 1 of 9)
 |ccre_category=pELS
@@ Line 15: / Line 16: @@
 |gene_description=zinc finger RANBP2-type containing 1
 |gene_id=54764
-|gene_name=ZRANB1
+|gene_name=zinc finger RANBP2-type containing 1
 |gene_source=HGNC:18224
 |gene_symbol=ZRANB1
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_017580
 |nearest_refseq=NM_017580
+|nearest_transcripts=LF370167:-128 MA605744:-128 BC152728:-394 AK307386:-401
 |nearest_unigene=Hs.595158
 |peak_score=1