TSS: Hg 102693.1: Difference between revisions
From referenceTSS
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|NEAS= | |NEAS= | ||
|SPTA2= | |SPTA2= | ||
|all_trans=ENST00000434999. | |all_trans=ENST00000434999.2:0 ENST00000660288.1:0 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
|distance=0 | |distance=0 | ||
|distance_to_tss=- | |distance_to_tss=-181 | ||
|end=128552423 | |end=128552423 | ||
|end_of_center_position=128552406 | |||
|entrez_id=6709 | |entrez_id=6709 | ||
|gc_percent=0.776119 | |gc_percent=0.776119 | ||
|gene_alias=EIEE5 | |gene_alias=EIEE5{{!}}NEAS{{!}}SPTA2 | ||
|gene_description= | |gene_description=spectrin alpha, non-erythrocytic 1 | ||
|gene_name=SPTAN1 | |gene_name=SPTAN1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 21: | Line 22: | ||
|species=human | |species=human | ||
|start=128552388 | |start=128552388 | ||
|start_of_center_position=128552405 | |||
|strand=- | |strand=- | ||
|transcript_name=ENST00000434999. | |transcript_name=ENST00000434999.2 ENST00000660288.1 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102693.1 | |tss_id=hg_102693.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:09, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -181 |
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| Nearest PromoterID: | NM_001130438 |
| Entrez ID: | 6709 |
| Nearest Unigene: | Hs.372331 |
| Nearest Refseq: | NM_003127 |
| Nearest Ensembl: | ENSG00000197694 |
| Gene Name: | SPTAN1 |
| Gene Alias: | EIEE5|NEAS|SPTA2 |
| Gene Description: | spectrin alpha, non-erythrocytic 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.776119 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |