TSS: Hg 102804.1: Difference between revisions
From referenceTSS
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|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance= | |distance=NA | ||
|distance_to_tss= | |distance_to_tss=2561 | ||
|end=130174968 | |end=130174968 | ||
|end_of_center_position=130174965 | |||
|entrez_id=23413 | |entrez_id=23413 | ||
|gc_percent=0.527363 | |gc_percent=0.527363 | ||
|gene_alias=FLUP | |gene_alias=FLUP{{!}}FREQ | ||
|gene_description=neuronal calcium sensor 1 | |gene_description=neuronal calcium sensor 1 | ||
|gene_name=NCS1 | |gene_name=NCS1 | ||
| Line 19: | Line 20: | ||
|species=human | |species=human | ||
|start=130174961 | |start=130174961 | ||
|start_of_center_position=130174964 | |||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=-36(GGCCTTTAAAAA,-,0.00),-35(GCCTTTAAAAAT,-,0.00) | ||
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 17:12, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 2561 |
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| Nearest PromoterID: | NM_014286 |
| Entrez ID: | 23413 |
| Nearest Unigene: | Hs.642946 |
| Nearest Refseq: | NM_014286 |
| Nearest Ensembl: | ENSG00000107130 |
| Gene Name: | NCS1 |
| Gene Alias: | FLUP|FREQ |
| Gene Description: | neuronal calcium sensor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -36(GGCCTTTAAAAA,-,0.00),-35(GCCTTTAAAAAT,-,0.00) |