TSS: Hg 102875.1: Difference between revisions
From referenceTSS
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|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance= | |distance=NA | ||
|distance_to_tss=3188 | |distance_to_tss=3188 | ||
|end=131734359 | |end=131734359 | ||
|end_of_center_position=131734350 | |||
|entrez_id=2889 | |entrez_id=2889 | ||
|gc_percent=0.507463 | |gc_percent=0.507463 | ||
|gene_alias=C3G | |gene_alias=C3G{{!}}GRF2 | ||
|gene_description=Rap guanine nucleotide exchange factor 1 | |gene_description=Rap guanine nucleotide exchange factor 1 | ||
|gene_name=RAPGEF1 | |gene_name=RAPGEF1 | ||
| Line 19: | Line 20: | ||
|species=human | |species=human | ||
|start=131734340 | |start=131734340 | ||
|start_of_center_position=131734349 | |||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=-27(GCATTTATAGAC,+,0.00) | ||
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 17:13, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 3188 |
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| Nearest PromoterID: | NM_005312 |
| Entrez ID: | 2889 |
| Nearest Unigene: | Hs.127897 |
| Nearest Refseq: | NM_005312 |
| Nearest Ensembl: | ENSG00000107263 |
| Gene Name: | RAPGEF1 |
| Gene Alias: | C3G|GRF2 |
| Gene Description: | Rap guanine nucleotide exchange factor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -27(GCATTTATAGAC,+,0.00) |