TSS: Hg 103017.1: Difference between revisions
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{{TSSDetail | {{TSSDetail | ||
|TMEM226= | |TMEM226= | ||
|all_trans= | |all_trans=HGNC:33778 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
|distance= | |distance=0 | ||
|distance_to_tss= | |distance_to_tss=2 | ||
|end=133524965 | |end=133524965 | ||
|end_of_center_position=133524958 | |||
|entrez_id=389827 | |entrez_id=389827 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
|gene_alias=MYOMAKER | |gene_alias=MYOMAKER{{!}}TMEM226{{!}}TMEM8C | ||
|gene_description= | |gene_description=myomaker, myoblast fusion factor | ||
|gene_id=389827 | |gene_id=389827 | ||
|gene_name= | |gene_name=myomaker, myoblast fusion factor | ||
|gene_source=HGNC:33778 | |gene_source=HGNC:33778 | ||
|gene_symbol= | |gene_symbol=MYMK | ||
|gene_synonyms=TMEM226 | |gene_synonyms=TMEM226 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 21: | Line 22: | ||
|nearest_promoter_id=NM_001080483 | |nearest_promoter_id=NM_001080483 | ||
|nearest_refseq=NM_001080483 | |nearest_refseq=NM_001080483 | ||
|nearest_unigene= | |nearest_unigene= | ||
|num_trans= | |num_trans=389827 | ||
|species=human | |species=human | ||
|start=133524949 | |start=133524949 | ||
|start_of_center_position=133524957 | |||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=-33(GCATTTAAACCC,+,0.00) | ||
|transcript_name=ENST00000339996. | |transcript_name=ENST00000339996.4 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_103017.1 | |tss_id=hg_103017.1 | ||
Latest revision as of 18:39, 19 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 2 |
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| Nearest PromoterID: | NM_001080483 |
| Entrez ID: | 389827 |
| Nearest Unigene: | |
| Nearest Refseq: | NM_001080483 |
| Nearest Ensembl: | ENSG00000187616 |
| Gene Name: | myomaker, myoblast fusion factor |
| Gene Alias: | MYOMAKER|TMEM226|TMEM8C |
| Gene Description: | myomaker, myoblast fusion factor |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -33(GCATTTAAACCC,+,0.00) |
TSS expression
Expression data not found.