TSS: Rfhg 170269.1: Difference between revisions

Latest revision as of 09:12, 14 March 2025

Basic information about the TSS

TSS ID:	rfhg_170269.1
Species:	human
Chr:	chr14

Start:	100846470
End:	100846483
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	dELS (EH38D2760386,EH38E1742839)
Category:	dELS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	LF330480:-208 MA566057:-208
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:	LF330481:330 MA566058:330 LF330479:-336 MA566056:-336 LF330482:439 MA566059:439 view more...

Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	-5914
Nearest PromoterID:	NR_030528
Entrez ID:	768222
Nearest Unigene:
Nearest Refseq:	NR_030528
Nearest Ensembl:	ENSG00000211574
Gene Name:
Gene Alias:	MIRN770\|hsa-mir-770
Gene Type:	ncRNA
CpG%:	0.000000
GC%:	0.571429
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=LF330480:-208 MA566057:-208 LF330481:330 MA566058:330 LF330479:-336 MA566056:-336 LF330482:439 MA566059:439
 |annotation=non-coding (NR_046473, exon 7 of 7)
 |ccre_category=dELS
@@ Line 15: / Line 16: @@
 |gene_description=microRNA 770
 |gene_id=
-|gene_name=MIR770
+|gene_name=
 |gene_source=
 |gene_symbol=
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NR_030528
 |nearest_refseq=NR_030528
+|nearest_transcripts=LF330481:330 MA566058:330 LF330479:-336 MA566056:-336 LF330482:439 MA566059:439
 |nearest_unigene=
 |peak_score=1