TSS: Rfhg 175301.1: Difference between revisions

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{{TSSDetailV4
{{TSSDetailV4
|all_trans=ENST00000560258.6:0 ENST00000559753.1:0 ENST00000560837.5:0 ENST00000559912.2:0 ENST00000560781.6:0 ENST00000559665.6:0 BC035493:0 BC092483:0 AF057297:0 BC063577:0 BC119629:0 BC148316:0 BC127630:0 BC127631:0 BC119630:0 BC073877:0 AF242520:0 AF242521:0 BC047755:-26 ENST00000326005.10:-44 NM_002537.3:-44 NM_001301302.1:-44
|annotation=promoter-TSS (NM_002537)
|annotation=promoter-TSS (NM_002537)
|ccre_category=PLS
|ccre_category=PLS
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|gene_description=ornithine decarboxylase antizyme 2
|gene_description=ornithine decarboxylase antizyme 2
|gene_id=4947
|gene_id=4947
|gene_name=OAZ2
|gene_name=ornithine decarboxylase antizyme 2
|gene_source=HGNC:8096
|gene_source=HGNC:8096
|gene_symbol=OAZ2
|gene_symbol=OAZ2
Line 25: Line 26:
|nearest_promoter_id=NM_002537
|nearest_promoter_id=NM_002537
|nearest_refseq=NM_002537
|nearest_refseq=NM_002537
|nearest_transcripts=BC047755:-26 ENST00000326005.10:-44 NM_002537.3:-44 NM_001301302.1:-44
|nearest_unigene=Hs.744924
|nearest_unigene=Hs.744924
|peak_score=1
|peak_score=1

Latest revision as of 10:43, 14 March 2025

Basic information about the TSS

TSS ID:rfhg_175301.1
TSS ID(Version3):hg_150486.1
Species:human
Chr:chr15
Start:64703126
End:64703237
Strand:-
Source datasetsFANTOM5|EPD|DBTSS|DRA000914|ENCODE|DRA013844|PRJNA401781
|PRJNA548673|PRJNA615891|PRJNA4843412|PRJDB5282
ProtocolCAGE|TSS_database|TSS-seq|oligo_capping|ReCappable-seq
|SLIC_CAGE|TIF-seq2|NETCAGE|C1CAGE|RAMPAGE
TSS cluster detected*15

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation

Description:PLS,CTCF-bound (EH38D2799750,EH38E1770128)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation

Nearest transcript id and distance:ENST00000560258.6:0
ENST00000559753.1:0
ENST00000560837.5:0
ENST00000559912.2:0
ENST00000560781.6:0
ENST00000559665.6:0
BC035493:0
BC092483:0
AF057297:0
BC063577:0
BC119629:0
BC148316:0
BC127630:0
BC127631:0
BC119630:0
BC073877:0
AF242520:0
AF242521:0
GeneID:4947
HGNC/MGI_ID:HGNC:8096
UniProt_ID:J3KRW5 J3KS80 J3QLV9 O95190 Q9HD73
Nearer transcript ids and distances:
  • BC047755:-26
  • ENST00000326005.10:-44
  • NM_002537.3:-44
  • NM_001301302.1:-44
view more...
Gene_name:ornithine decarboxylase antizyme 2
Gene_symbol:OAZ2
Gene_synonyms:
Gene_source:HGNC:8096



TATA-Box annotation

Distance to TSS:100
Nearest PromoterID:NM_002537
Entrez ID:4947
Nearest Unigene:Hs.744924
Nearest Refseq:NM_002537
Nearest Ensembl:ENSG00000180304
Gene Name:ornithine decarboxylase antizyme 2
Gene Alias:AZ2
Gene Type:protein-coding
CpG%:0.135135
GC%:0.741071
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.
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