TSS: Hg 102319.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=-9730 |entrez_id=26147 |gc_percent=0.567164 |gene_alias=MTF2L1|PCL3|TDRD19B |gene_description=PHD finger protein 19 |gene_name=...") |
No edit summary |
||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|PCL3= | |||
|TDRD19B= | |||
|chr=chr9 | |||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance=NA | |||
|distance_to_tss=-9730 | |distance_to_tss=-9730 | ||
|end=120904632 | |||
|end_of_center_position=120904627 | |||
|entrez_id=26147 | |entrez_id=26147 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
|gene_alias=MTF2L1 | |gene_alias=MTF2L1{{!}}PCL3{{!}}TDRD19B | ||
|gene_description=PHD finger protein 19 | |gene_description=PHD finger protein 19 | ||
|gene_name=PHF19 | |gene_name=PHF19 | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_015651 | |nearest_refseq=NM_015651 | ||
|nearest_unigene=Hs.460124 | |nearest_unigene=Hs.460124 | ||
|num_trans=0 | |||
|species=human | |||
|start=120904620 | |||
|start_of_center_position=120904626 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_102319.1 | |tss_id=hg_102319.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 17:00, 15 June 2021
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | -9730 |
|---|---|
| Nearest PromoterID: | NM_001286840 |
| Entrez ID: | 26147 |
| Nearest Unigene: | Hs.460124 |
| Nearest Refseq: | NM_015651 |
| Nearest Ensembl: | ENSG00000119403 |
| Gene Name: | PHF19 |
| Gene Alias: | MTF2L1|PCL3|TDRD19B |
| Gene Description: | PHD finger protein 19 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |