TSS: Mm 130774.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000061185.6:0 NM_001166157:0 uc007xth.2:0 AF312018:333 AF312019:333 |chr=chr15 |cpg_percent=0.03 |distance=0 |distance_to_tss=1 |end=101463770...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENSMUST00000061185. | |Krt2-19= | ||
|all_trans=NM_001166157:0 ENSMUST00000061185.7:8 ENSMUST00000230541.1:245 AF312018:333 AF312019:333 | |||
|chr=chr15 | |chr=chr15 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=1 | |distance_to_tss=1 | ||
|end=101463770 | |end=101463770 | ||
|end_of_center_position=101463765 | |||
|entrez_id=64818 | |entrez_id=64818 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
|gene_alias=AA589625 | |gene_alias=AA589625{{!}}Krt2-19 | ||
|gene_description=keratin 81 | |gene_description=keratin 81 | ||
|gene_id=64818 | |gene_id=64818 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=101463758 | |start=101463758 | ||
|start_of_center_position=101463764 | |||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=-32(CCATAAATAGGA,+,0.00) | ||
|transcript_name= | |transcript_name=NM_001166157.1 | ||
|tss_classification= | |tss_classification=yes | ||
|tss_id=mm_130774.1 | |tss_id=mm_130774.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q9ERE2 | |uniprot_id=Q9ERE2 | ||
}} | }} | ||
Latest revision as of 21:44, 26 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 1 |
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| Nearest PromoterID: | NM_001166157 |
| Entrez ID: | 64818 |
| Nearest Unigene: | Mm.347934 |
| Nearest Refseq: | NM_001166157 |
| Nearest Ensembl: | ENSMUSG00000067615 |
| Gene Name: | keratin 81 |
| Gene Alias: | AA589625|Krt2-19 |
| Gene Description: | keratin 81 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -32(CCATAAATAGGA,+,0.00) |
TSS expression
Expression data not found.