TSS: Hg 102331.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|MGC:10353= | |||
|chr=chr9 | |||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=NA | |||
|distance_to_tss=-2050 | |distance_to_tss=-2050 | ||
|end=120931235 | |||
|end_of_center_position=120931224 | |||
|entrez_id=7185 | |entrez_id=7185 | ||
|gc_percent=0.40796 | |gc_percent=0.40796 | ||
|gene_alias=EBI6 | |gene_alias=EBI6{{!}}MGC:10353 | ||
|gene_description=TNF receptor associated factor 1 | |gene_description=TNF receptor associated factor 1 | ||
|gene_name=TRAF1 | |gene_name=TRAF1 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_005658 | |nearest_refseq=NM_005658 | ||
|nearest_unigene=Hs.531251 | |nearest_unigene=Hs.531251 | ||
|num_trans=0 | |||
|species=human | |||
|start=120931211 | |||
|start_of_center_position=120931223 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_102331.1 | |tss_id=hg_102331.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 17:01, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -2050 |
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| Nearest PromoterID: | NM_001190945 |
| Entrez ID: | 7185 |
| Nearest Unigene: | Hs.531251 |
| Nearest Refseq: | NM_005658 |
| Nearest Ensembl: | ENSG00000056558 |
| Gene Name: | TRAF1 |
| Gene Alias: | EBI6|MGC:10353 |
| Gene Description: | TNF receptor associated factor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.40796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |