TSS: Rfhg 198519.1: Difference between revisions

Latest revision as of 18:01, 14 March 2025

Basic information about the TSS

TSS ID:	rfhg_198519.1
Species:	human
Chr:	chr17

Start:	75286712
End:	75286712
Strand:	-

Source datasets

EPD

Protocol

TSS_database

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000582822.1:-11
GeneID:	60386
HGNC/MGI_ID:	HGNC:14409
UniProt_ID:	J3KSB1
Nearer transcript ids and distances:	AF182404:-52 AY346372:-52 DQ892760:-52 DQ896005:-52 AK225881:-89 AJ251857:-90 view more...

Gene_name:	solute carrier family 25 member 19
Gene_symbol:	SLC25A19
Gene_synonyms:	DNC MUP1 TPC
Gene_source:	HGNC:14409

TATA-Box annotation

Distance to TSS:	2721
Nearest PromoterID:	NM_001126121
Entrez ID:	60386
Nearest Unigene:	Hs.514470
Nearest Refseq:	NM_021734
Nearest Ensembl:	ENSG00000125454
Gene Name:	solute carrier family 25 member 19
Gene Alias:	DNC\|MCPHA\|MUP1\|THMD3\|THMD4\|TPC
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=ENST00000582822.1:-11 AF182404:-52 AY346372:-52 DQ892760:-52 DQ896005:-52 AK225881:-89 AJ251857:-90
 |annotation=exon (NM_021734, exon 3 of 8)
 |ccre_category=N
@@ Line 15: / Line 16: @@
 |gene_description=solute carrier family 25 member 19
 |gene_id=60386
-|gene_name=SLC25A19
+|gene_name=solute carrier family 25 member 19
 |gene_source=HGNC:14409
 |gene_symbol=SLC25A19
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_001126121
 |nearest_refseq=NM_021734
+|nearest_transcripts=AF182404:-52 AY346372:-52 DQ892760:-52 DQ896005:-52 AK225881:-89 AJ251857:-90
 |nearest_unigene=Hs.514470
 |peak_score=1