TSS: Rfhg 19852.1: Difference between revisions

Latest revision as of 18:01, 14 March 2025

Basic information about the TSS

TSS ID:	rfhg_19852.1
Species:	human
Chr:	chr1

Start:	214966542
End:	214966546
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	dELS,CTCF-bound (EH38D2275425,EH38E1421727)
Category:	dELS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:

Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	-38998
Nearest PromoterID:	NM_001017424
Entrez ID:	3776
Nearest Unigene:	Hs.497745
Nearest Refseq:	NM_014217
Nearest Ensembl:	ENSG00000082482
Gene Name:
Gene Alias:	K2p2.1\|TPKC1\|TREK\|TREK-1\|TREK1\|hTREK-1c\|hTREK-1e
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.200000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=
 |annotation=Intergenic
 |ccre_category=dELS
@@ Line 15: / Line 16: @@
 |gene_description=potassium two pore domain channel subfamily K member 2
 |gene_id=
-|gene_name=KCNK2
+|gene_name=
 |gene_source=
 |gene_symbol=
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_001017424
 |nearest_refseq=NM_014217
+|nearest_transcripts=
 |nearest_unigene=Hs.497745
 |peak_score=1