TSS: Rfhg 200579.1: Difference between revisions

Latest revision as of 18:40, 14 March 2025

Basic information about the TSS

TSS ID:	rfhg_200579.1
Species:	human
Chr:	chr17

Start:	82450694
End:	82450781
Strand:	-

Source datasets

Protocol

TSS cluster detected^*

9

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS,CTCF-bound (EH38D2972330,EH38E1893475)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000306645.10:0 ENST00000342572.12:0 ENST00000437807.6:0 ENST00000584024.5:0 ENST00000583617.5:0 ENST00000585064.5:0 ENST00000578919.5:0 ENST00000580560.5:0 ENST00000584503.5:0 ENST00000585080.5:0 ENST00000577888.5:0 ENST00000577707.5:0 ENST00000578913.5:0 ENST00000584891.5:0 ENST00000584408.5:0 ENST00000577696.5:0 ENST00000577471.5:0 ENST00000577834.5:0 ENST00000578064.1:0 ENST00000582395.5:0 ENST00000582608.5:0 ENST00000582545.2:0 ENST00000583359.1:0 ENST00000583778.1:0 ENST00000583242.1:0 ENST00000585115.1:0 ENST00000584791.1:0 AK027743:0 BC003595:0 BC004171:0 AK225389:0 AK074950:0 AK056342:0
GeneID:	79415
HGNC/MGI_ID:	HGNC:28672
UniProt_ID:	A0A024R8W9 A0A0U1RQN8 H0Y2X1 J3KS78 J3KSB6 J3KSJ5 J3KTI1 J3QKS6 J3QLB7 J3QRG5 J3QRZ2 J3QS53
Nearer transcript ids and distances:	ENST00000582456.1:24 ENST00000434650.6:-48 ENST00000581196.5:-48 ENST00000578941.5:-48 AK054876:-48 AK309201:-48 view more...

Gene_name:	cytochrome b-245 chaperone 1
Gene_symbol:	CYBC1
Gene_synonyms:	Eros FLJ90469 MGC4368
Gene_source:	HGNC:28672

TATA-Box annotation

Distance to TSS:	15
Nearest PromoterID:	NM_001100407
Entrez ID:	79415
Nearest Unigene:	Hs.163113
Nearest Refseq:	NM_001033046
Nearest Ensembl:	ENSG00000178927
Gene Name:	cytochrome b-245 chaperone 1
Gene Alias:	C17orf62\|Eros
Gene Type:	protein-coding
CpG%:	0.160920
GC%:	0.761364
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=ENST00000306645.10:0 ENST00000342572.12:0 ENST00000437807.6:0 ENST00000584024.5:0 ENST00000583617.5:0 ENST00000585064.5:0 ENST00000578919.5:0 ENST00000580560.5:0 ENST00000584503.5:0 ENST00000585080.5:0 ENST00000577888.5:0 ENST00000577707.5:0 ENST00000578913.5:0 ENST00000584891.5:0 ENST00000584408.5:0 ENST00000577696.5:0 ENST00000577471.5:0 ENST00000577834.5:0 ENST00000578064.1:0 ENST00000582395.5:0 ENST00000582608.5:0 ENST00000582545.2:0 ENST00000583359.1:0 ENST00000583778.1:0 ENST00000583242.1:0 ENST00000585115.1:0 ENST00000584791.1:0 NM_001193653.2:0 NM_001193654.2:0 NM_001193657.2:0 NM_001100407.3:0 NM_001033046.4:0 NM_001100408.3:0 NR_036514.2:0 NR_036516.2:0 NR_036517.2:0 NR_036518.2:0 NR_036519.2:0 AK027743:0 BC003595:0 BC004171:0 AK225389:0 AK074950:0 AK056342:0 ENST00000582456.1:24 ENST00000434650.6:-48 ENST00000581196.5:-48 ENST00000578941.5:-48 AK054876:-48 AK309201:-48
 |annotation=promoter-TSS (NM_001193654)
 |ccre_category=PLS
@@ Line 15: / Line 16: @@
 |gene_description=cytochrome b-245 chaperone 1
 |gene_id=79415
-|gene_name=CYBC1
+|gene_name=cytochrome b-245 chaperone 1
 |gene_source=HGNC:28672
 |gene_symbol=CYBC1
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_001100407
 |nearest_refseq=NM_001033046
+|nearest_transcripts=ENST00000582456.1:24 ENST00000434650.6:-48 ENST00000581196.5:-48 ENST00000578941.5:-48 AK054876:-48 AK309201:-48
 |nearest_unigene=Hs.163113
 |peak_score=1