TSS: Hg 102344.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=963 |entrez_id=2934 |gc_percent=0.562189 |gene_alias=ADF|AGEL |gene_description=gelsolin |gene_name=GSN |gene_type=protein-codin...") |
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{{TSSDetail | {{TSSDetail | ||
|AGEL= | |||
|chr=chr9 | |||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=-860 | |||
|end=121269072 | |||
|end_of_center_position=121269065 | |||
|entrez_id=2934 | |entrez_id=2934 | ||
|gc_percent=0.562189 | |gc_percent=0.562189 | ||
|gene_alias=ADF | |gene_alias=ADF{{!}}AGEL | ||
|gene_description=gelsolin | |gene_description=gelsolin | ||
|gene_name=GSN | |gene_name=GSN | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000148180 | |nearest_ensembl=ENSG00000148180 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001353062 | ||
|nearest_refseq=NM_000177 | |nearest_refseq=NM_000177 | ||
|nearest_unigene=Hs.522373 | |nearest_unigene=Hs.522373 | ||
|tata_box= | |num_trans=0 | ||
|species=human | |||
|start=121269057 | |||
|start_of_center_position=121269064 | |||
|strand=- | |||
|tata_box=-34(GTGTTTTAAAGC,-,0.00) | |||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_102344.1 | |tss_id=hg_102344.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 17:01, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -860 |
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| Nearest PromoterID: | NM_001353062 |
| Entrez ID: | 2934 |
| Nearest Unigene: | Hs.522373 |
| Nearest Refseq: | NM_000177 |
| Nearest Ensembl: | ENSG00000148180 |
| Gene Name: | GSN |
| Gene Alias: | ADF|AGEL |
| Gene Description: | gelsolin |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -34(GTGTTTTAAAGC,-,0.00) |