TSS: Hg 102348.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=16550 |entrez_id=2040 |gc_percent=0.497512 |gene_alias=BND7|EPB7|EPB72 |gene_description=stomatin |gene_name=STOM |gene_type=pro...") |
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{{TSSDetail | {{TSSDetail | ||
|EPB7= | |||
|EPB72= | |||
|all_trans=LF346993:-155 MA582570:-155 | |||
|chr=chr9 | |||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance_to_tss= | |distance=-155 | ||
|distance_to_tss=16496 | |||
|end=121353766 | |||
|end_of_center_position=121353754 | |||
|entrez_id=2040 | |entrez_id=2040 | ||
|gc_percent=0.497512 | |gc_percent=0.497512 | ||
|gene_alias=BND7 | |gene_alias=BND7{{!}}EPB7{{!}}EPB72 | ||
|gene_description=stomatin | |gene_description=stomatin | ||
|gene_name=STOM | |gene_name=STOM | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000148175 | |nearest_ensembl=ENSG00000148175 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_198194 | ||
|nearest_refseq=NM_004099 | |nearest_refseq=NM_004099 | ||
|nearest_unigene=Hs.253903 | |nearest_unigene=Hs.253903 | ||
|num_trans=2 | |||
|species=human | |||
|start=121353741 | |||
|start_of_center_position=121353753 | |||
|strand=- | |||
|transcript_name=LF346993 MA582570 | |||
|tss_classification=no | |||
|tss_id=hg_102348.1 | |tss_id=hg_102348.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 17:01, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 16496 |
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| Nearest PromoterID: | NM_198194 |
| Entrez ID: | 2040 |
| Nearest Unigene: | Hs.253903 |
| Nearest Refseq: | NM_004099 |
| Nearest Ensembl: | ENSG00000148175 |
| Gene Name: | STOM |
| Gene Alias: | BND7|EPB7|EPB72 |
| Gene Description: | stomatin |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.497512 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |