TSS: Hg 10235.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.07 |distance_to_tss=-43728 |entrez_id=101929074 |gc_percent=0.59204 |gene_alias=- |gene_description=PIK3CD antisense RNA 2 |gene_name=PIK3CD-AS2 |ge...") |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|all_trans=LF357457:0 MA593034:0 LF357456:-40 MA593033:-40 | |||
|chr=chr1 | |||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
|distance_to_tss= | |distance=0 | ||
|entrez_id= | |distance_to_tss=39835 | ||
|end=9731325 | |||
|end_of_center_position=9731303 | |||
|entrez_id=5293 | |||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
|gene_alias= | |gene_alias=APDS{{!}}IMD14{{!}}P110DELTA{{!}}PI3K{{!}}p110D | ||
|gene_description= | |gene_description=phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta | ||
|gene_name=PIK3CD | |gene_name=PIK3CD | ||
|gene_type= | |gene_type=protein-coding | ||
|nearest_ensembl= | |nearest_ensembl=ENSG00000171608 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001350235 | ||
|nearest_refseq= | |nearest_refseq=NM_005026 | ||
|nearest_unigene=Hs. | |nearest_unigene=Hs.518451 | ||
|num_trans=4 | |||
|species=human | |||
|start=9731279 | |||
|start_of_center_position=9731302 | |||
|strand=- | |||
|transcript_name=LF357457 MA593034 | |||
|tss_classification=yes | |||
|tss_id=hg_10235.1 | |tss_id=hg_10235.1 | ||
|tss_score=1 | |||
}} | }} |
Latest revision as of 18:23, 12 July 2021
Basic information about the TSS
|
| |||||||||||||
TSS cluster detected* |
---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
Distance to TSS: | 39835 |
---|---|
Nearest PromoterID: | NM_001350235 |
Entrez ID: | 5293 |
Nearest Unigene: | Hs.518451 |
Nearest Refseq: | NM_005026 |
Nearest Ensembl: | ENSG00000171608 |
Gene Name: | PIK3CD |
Gene Alias: | APDS|IMD14|P110DELTA|PI3K|p110D |
Gene Description: | phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta |
Gene Type: | protein-coding |
CpG%: | 0.07 |
GC%: | 0.59204 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |