TSS: Rfhg 214784.1: Difference between revisions

Latest revision as of 23:12, 14 March 2025

Basic information about the TSS

TSS ID:	rfhg_214784.1
Species:	human
Chr:	chr19

Start:	49489966
End:	49489969
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS,CTCF-bound (EH38D3070400,EH38E1960914)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	NR_000021.1:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:	ENST00000364805.1:-1 ENST00000678713.1:-103 ENST00000476268.6:-116 BC004900:-116 ENST00000678187.1:-182 AB082924:320 view more...

Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	1
Nearest PromoterID:	NR_000021
Entrez ID:	26819
Nearest Unigene:
Nearest Refseq:	NR_000021
Nearest Ensembl:	ENSG00000201675
Gene Name:
Gene Alias:	RNU32\|U32\|U32A
Gene Type:	snoRNA
CpG%:	0.000000
GC%:	0.500000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=NR_000021.1:0 ENST00000364805.1:-1 ENST00000678713.1:-103 ENST00000476268.6:-116 BC004900:-116 ENST00000678187.1:-182 AB082924:320
 |annotation=promoter-TSS (NR_000021)
 |ccre_category=PLS
@@ Line 15: / Line 16: @@
 |gene_description=small nucleolar RNA, C/D box 32A
 |gene_id=
-|gene_name=SNORD32A
+|gene_name=
 |gene_source=
 |gene_symbol=
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NR_000021
 |nearest_refseq=NR_000021
+|nearest_transcripts=ENST00000364805.1:-1 ENST00000678713.1:-103 ENST00000476268.6:-116 BC004900:-116 ENST00000678187.1:-182 AB082924:320
 |nearest_unigene=
 |peak_score=1