TSS: Rfhg 219497.1: Difference between revisions

Latest revision as of 00:38, 15 March 2025

Basic information about the TSS

TSS ID:	rfhg_219497.1
Species:	human
Chr:	chr20

Start:	33079641
End:	33079645
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000375483.4:0 ENST00000445356.1:0
GeneID:	149954
HGNC/MGI_ID:	HGNC:16179
UniProt_ID:	F8WEG9 P59827
Nearer transcript ids and distances:

Gene_name:	BPI fold containing family B member 4
Gene_symbol:	BPIFB4
Gene_synonyms:	LPLUNC4 dJ726C3.5
Gene_source:	HGNC:16179

TATA-Box annotation

Distance to TSS:	-1869
Nearest PromoterID:	NM_182519
Entrez ID:	149954
Nearest Unigene:	Hs.38961
Nearest Refseq:	NM_182519
Nearest Ensembl:	ENSG00000186191
Gene Name:	BPI fold containing family B member 4
Gene Alias:	C20orf186\|LPLUNC4\|RY2G5\|dJ726C3.5
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.600000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=ENST00000375483.4:0 ENST00000445356.1:0 NM_182519.3:0
 |annotation=Intergenic
 |ccre_category=N
@@ Line 15: / Line 16: @@
 |gene_description=BPI fold containing family B member 4
 |gene_id=149954
-|gene_name=BPIFB4
+|gene_name=BPI fold containing family B member 4
 |gene_source=HGNC:16179
 |gene_symbol=BPIFB4
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_182519
 |nearest_refseq=NM_182519
+|nearest_transcripts=
 |nearest_unigene=Hs.38961
 |peak_score=1