TSS: Rfhg 22270.1: Difference between revisions

From referenceTSS
Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{TSSDetailV4
{{TSSDetailV4
|all_trans=ENST00000543802.3:0 ENST00000340684.10:0 NM_001243740.3:0 NM_001297567.2:0 NM_001297568.2:0 NM_003431.5:0 NM_001297569.2:0 AK054647:0 ENST00000472531.5:4 ENST00000491848.1:4 ENST00000491356.5:7 BC013605:7 BC096349:42 BC096350:42 BC096351:42 BC099661:42 BC032514:59 KJ905338:129 KJ905339:129
|annotation=promoter-TSS (NM_001243740)
|annotation=promoter-TSS (NM_001243740)
|ccre_category=N
|ccre_category=N
Line 15: Line 16:
|gene_description=zinc finger protein 124
|gene_description=zinc finger protein 124
|gene_id=7678
|gene_id=7678
|gene_name=ZNF124
|gene_name=zinc finger protein 124
|gene_source=HGNC:12907
|gene_source=HGNC:12907
|gene_symbol=ZNF124
|gene_symbol=ZNF124
Line 25: Line 26:
|nearest_promoter_id=NM_001297568
|nearest_promoter_id=NM_001297568
|nearest_refseq=NM_003431
|nearest_refseq=NM_003431
|nearest_transcripts=ENST00000472531.5:4 ENST00000491848.1:4 ENST00000491356.5:7 BC013605:7 BC096349:42 BC096350:42 BC096351:42 BC099661:42 BC032514:59 KJ905338:129 KJ905339:129
|nearest_unigene=Hs.421238
|nearest_unigene=Hs.421238
|peak_score=1
|peak_score=1

Latest revision as of 01:36, 15 March 2025

Basic information about the TSS

TSS ID:rfhg_22270.1
Species:human
Chr:chr1
Start:247172009
End:247172021
Strand:-
Source datasetsEPD|DRA000914
ProtocolTSS_database|CAGE
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation

Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation

Nearest transcript id and distance:ENST00000543802.3:0
ENST00000340684.10:0
AK054647:0
GeneID:7678
HGNC/MGI_ID:HGNC:12907
UniProt_ID:Q15973
Nearer transcript ids and distances:
  • ENST00000472531.5:4
  • ENST00000491848.1:4
  • ENST00000491356.5:7
  • BC013605:7
  • BC096349:42
  • BC096350:42
  • BC096351:42
  • BC099661:42
  • BC032514:59
  • KJ905338:129
  • KJ905339:129
view more...
Gene_name:zinc finger protein 124
Gene_symbol:ZNF124
Gene_synonyms:HZF-16 HZF16
Gene_source:HGNC:12907



TATA-Box annotation

Distance to TSS:2
Nearest PromoterID:NM_001297568
Entrez ID:7678
Nearest Unigene:Hs.421238
Nearest Refseq:NM_003431
Nearest Ensembl:ENSG00000196418
Gene Name:zinc finger protein 124
Gene Alias:HZF-16|HZF16|ZK7
Gene Type:protein-coding
CpG%:0.083333
GC%:0.692308
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.
Retrieved from "https://reftss.riken.jp/reftss/index.php?title=TSS:Rfhg_22270.1&oldid=3705629"