TSS: Mm 137501.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans= | |all_trans=MGI:1918022 MGI:6303071 | ||
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=11 | |distance_to_tss=11 | ||
|end=26973219 | |end=26973219 | ||
|end_of_center_position=26973191 | |||
|entrez_id=474156 | |entrez_id=474156 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
|gene_alias=3930402F13Rik | |gene_alias=3930402F13Rik | ||
|gene_description=zinc finger and BTB domain containing 9 | |gene_description=zinc finger and BTB domain containing 9 | ||
|gene_id=474156 | |gene_id=474156 | ||
|gene_name= | |gene_name=predicted gene, 50253; zinc finger and BTB domain containing 9 | ||
|gene_source=MGI:1918022 MGI: | |gene_source=MGI:1918022 MGI:6303071 | ||
|gene_symbol= | |gene_symbol=Gm50253 Zbtb9 | ||
|gene_synonyms= | |gene_synonyms=3930402F13Rik | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:1918022 MGI: | |hgnc_mgi_id=MGI:1918022 MGI:6303071 | ||
|nearest_ensembl=ENSMUSG00000079605 | |nearest_ensembl=ENSMUSG00000079605 | ||
|nearest_promoter_id=NM_001005916 | |nearest_promoter_id=NM_001005916 | ||
|nearest_refseq=NM_001005916 | |nearest_refseq=NM_001005916 | ||
|nearest_unigene=Mm.328890 | |nearest_unigene=Mm.328890 | ||
|num_trans= | |num_trans=474156 | ||
|species=mouse | |species=mouse | ||
|start=26973161 | |start=26973161 | ||
|start_of_center_position=26973190 | |||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000120016.1 ENSMUST00000133257. | |transcript_name=ENSMUST00000120016.2 ENSMUST00000237633.1 ENSMUST00000133257.8 BC049933 AK154850 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_137501.1 | |tss_id=mm_137501.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id=Q8CDC7 | ||
}} | }} | ||
Latest revision as of 00:12, 27 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 11 |
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| Nearest PromoterID: | NM_001005916 |
| Entrez ID: | 474156 |
| Nearest Unigene: | Mm.328890 |
| Nearest Refseq: | NM_001005916 |
| Nearest Ensembl: | ENSMUSG00000079605 |
| Gene Name: | predicted gene, 50253; zinc finger and BTB domain containing 9 |
| Gene Alias: | 3930402F13Rik |
| Gene Description: | zinc finger and BTB domain containing 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.