TSS: Rfhg 45087.1: Difference between revisions

Latest revision as of 13:33, 15 March 2025

Basic information about the TSS

TSS ID:	rfhg_45087.1
Species:	human
Chr:	chr3

Start:	48609734
End:	48609746
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	pELS,CTCF-bound (EH38D3424513,EH38E2199712)
Category:	pELS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:

Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	-94
Nearest PromoterID:	NM_003365
Entrez ID:	7384
Nearest Unigene:	Hs.119251
Nearest Refseq:	NM_003365
Nearest Ensembl:	ENSG00000010256
Gene Name:
Gene Alias:	D3S3191\|QCR1\|UQCR1
Gene Type:	protein-coding
CpG%:	0.083333
GC%:	0.615385
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=
 |annotation=promoter-TSS (NM_003365)
 |ccre_category=pELS
@@ Line 15: / Line 16: @@
 |gene_description=ubiquinol-cytochrome c reductase core protein 1
 |gene_id=
-|gene_name=UQCRC1
+|gene_name=
 |gene_source=
 |gene_symbol=
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_003365
 |nearest_refseq=NM_003365
+|nearest_transcripts=
 |nearest_unigene=Hs.119251
 |peak_score=1